Webb9 mars 2024 · Pasting the one-letter code of a protein, DNA, or RNA sequence in the top bar search box is recognized as a sequence similarity search request (Figure 1A). This sequence is automatically transferred to the Advanced Search Query Builder’s Sequence Similarity search and a search is performed for experimental structures and Computed … WebbRAPSearch2 is a tool for fast protein similarity searches. RAPSearch2 searches short DNA sequences (reads) or protein sequences against protein database, achieving >100 times …
BLAST: Basic Local Alignment Search Tool
Webb19 resources found for similarity search HAMAP UniProtKB family classification and annotation OMA Orthology inference among complete genomes SwissSimilarity Ligand-based virtual screening TagScan Genome-wide sequence tag scanner Progenetix Genomic profiles of cancer samples with focus on CNV pftools Build, calibrate, and search … Webb28 okt. 2011 · To address this challenge, we developed a new protein database search tool RAPSearch, which follows the seed-extension approach as used in BLAST, but is based … reason against animal testing
Extreme-Scale Many-against-Many Protein Similarity Search
Webb9 juli 2007 · Annotation of a genome involves assignment of functions to proteins in most cases on the basis of sequence similarity. Protein function assignments based on postulated homology as recognized by sequence identity or significant expectation value of alignment are used routinely in genome analysis. Webb8 nov. 2024 · eridincu/protein-similarity-computation-model This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository. main Webb15 apr. 2004 · The protein similarity network represents the degree of similarity between proteins by assigning weights to each edge. The degree of similarity between two sequences is commonly summarized in an Evalue, which is the expected number of times that this degree of sequence similarity would occur in a random database of the given … reason against hot humidifiers